Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015818552.1_cds_XP_016499670.1_13570
CDS Infomation

[gene=LOC107818230] [db_xref=GeneID:107818230] [protein=phospholipase D beta 1-like] [protein_id=XP_016499670.1] [location=join(3458..5128,5835..5951,6605..6799,8276..8524,8617..8685,8805..8981)] [gbkey=CDS]
Sequence

ATGGATCAGTATAATAATTCACCTTCTTACCCATATAACAATGCTTATGGGTACCCTCCT
CATGTTCCACCACCTTCAAATCAACCCTACCCCCCTCCCAGTTCAGGTGCATATCCTCCT
CCTGGTTCTGGTCCATACTCATATCCTCATCAATCCCCTCATTATCCTCCCCCTTACAGC
ACTCAACATTCTGGTCACTATAACTATCATCCCTATCCACCAGCTCCAACAGCACCTCCG
GCGCCCGCTCACCACCACTCCAGCTCTTTAGACTATGGTTATCCTCCACCACCACATGGT
GTTGCTCCTGCCTATCCACCCCACGCATATCCGCCTCCTGCAACATCTTCTCCTATGCCT
GCTCTTGAACAGCAAAGCAGTTTTCAATATGCTGCACCTCTGCATTATCCACATTCCTGG
CCAGAAAGGCCTTTGGAGAGCCAACCATCCAAAGTTCACGACTCTCTCCAACGCCAAGAT
AGTGTTTCATCTGTTAGTAGTTCTGGGGCAAGCTATGATCATGGTAGAGATGACTCCTCC
ACTCGCCCTTCAGCTTATCCACCAATCCATGATCTCTTAGCAAAGGTGAATTTGACTGAA
AATCACCCTTCTGCCCCTGCTTCTCCTCCTGCTCCGGCATCGGCATCGGCATCATATCAC
TCGGGGCCAAACCCTGTTCCCTCAAACTACAATGCTCAAGGGACTATCTATGGCCACCCT
AATTCCTTTTCAAGGTGGGAAACGGAGTCTCCAAAACCAACCTATCCAACTTCTTGTGCT
GAACCACAGAATACTCAGGCTATGCAGGTTGTGCCATTCTCGTCTTCTAAAAAAAACTTA
AAAGTTTTGCTCTTACACGGTAATCTGGATATTTGGGTATACGAAGCAAAAAATCTCCCG
AACATGGACATGTTCCACAAAACCATTGGGGATATGTTTGGGCAAATGAGTAATAAGATC
ACAAGTGATCCGTACGTCTCAATTACTGTAGCTGATGCAGTGATTGGGAGGACTTATGTC
ATAAGCAATAATGAAAATCCCGTGTGGATGCAACATTTTAATGTCCCTGTTGCACACTAT
GCTGCCGAGGTACAATTTCTTGTCAAGGACGATGATATAGTCGGTTCTCAGCTTATGGGG
ACAGTGGCTGTCCCACTAGAACAGATATATGGAGGGGGTAAAATAGAGGGGTCCTTTCCA
ATCCTAAACAGTAGCGGAAGACCTTGCAAGGCTGGAGCTGTTTTGAGTATATCAGTCCAA
TATTACCCAATTGATAAATTAAGTGTTTACCATCATGGAGTTGGTGCTGGTCCTGAGTAT
TATGGGGTTCCTGGAACGTACTTCCCACTGAGGATGGGTGGAACAGTTACTCTGTATCAA
GATGCTCATGTTCCTGATGGAAGCCTACCAAATTTGATGCTCGACTTTGGAATGCAATAT
GTACATGGAAAGTGCTGGCGTGACATTTGTAATGCCATACGCCAAGCCCGACGGTTGATC
TACATTACAGGTTGGTCAGTATGGCACAAAGTCAGACTTGTTAGAGATGATGCTTCTCTT
GACAAGTACACTCTAGGGGATCTTTTGAAGTCAAAGTCACAAGAAGGTGTTAGAGTGCTG
CTTCTTGTATGGGATGACCCTACATCAAGAAGCATCCTTGGCTATAAGACGGATGGCGTT
ATGGCAACCCATGATGAAGAGACTCGTAGTTTTTTTAAACACTCTTCCGTAAAAGTGCTG
CTTTGTCCTCGAGTGGCAGGGAAGCGTCACAGTTGGGTCAAGCAGAGGGAAGTTGGAGTA
ATTTATACACATCACCAGAAGACGGTAATAGTGGATGCTGATGCTGGCAACAATCGAAGA
AAAATCATAGCATTTGTTGGAGGACTTGATTTATGTGATGGACGATATGATACACCAGAG
CATCCTCTATTTCGAACACTGCAGACAGTGCACTCTGATGACTATCATAACCCTACTTAT
GCTGGGAGTGTAGCTGGTTGTCCAAGAGAACCATGGCATGACCTGCACAGTAAAATTGAT
GGGCCAGCAGCATATGATGTTCTCACAAACTTCGAGGAGCGCTGGTTGAAGGCTTCAAAG
CCTCATGGCATTAAAAAGTTGAAGACATCGTATGATGATGCTTTGCTCCGAATTGAAAGA
ATGCCTGAAATTCTTGGTATTTCTGATGCTCCATCTGTGAGCGGCGATGACCCTAACGGT
TGGCATGTACAGATTTTTCGTTCAATTGATTCAAATTCAGTCAAAGGCTTTCCAAAGGAT
CCCAAAGAAGCTACAATGAAGAACCTGGTCTGTGGGAAAAATGTACTTATTGACATGAGC
ATACACACAGCATATGTGAAGGCCATTCGTGCTGCACAACATTTCATTTACATTGAAAAT
CAATATTTTATTGGTTCCTCGTTCAATTGGAGTCAGCATAAAGATATTGGTAAGAAGATA
TTTTCATGCTATGTATAG

Peptide Sequence

PEP ID

XP_016499670.1
PEP Infomation

PREDICTED: phospholipase D beta 1-like [Nicotiana tabacum]
Sequence

MDQYNNSPSYPYNNAYGYPPHVPPPSNQPYPPPSSGAYPPPGSGPYSYPHQSPHYPPPYS
TQHSGHYNYHPYPPAPTAPPAPAHHHSSSLDYGYPPPPHGVAPAYPPHAYPPPATSSPMP
ALEQQSSFQYAAPLHYPHSWPERPLESQPSKVHDSLQRQDSVSSVSSSGASYDHGRDDSS
TRPSAYPPIHDLLAKVNLTENHPSAPASPPAPASASASYHSGPNPVPSNYNAQGTIYGHP
NSFSRWETESPKPTYPTSCAEPQNTQAMQVVPFSSSKKNLKVLLLHGNLDIWVYEAKNLP
NMDMFHKTIGDMFGQMSNKITSDPYVSITVADAVIGRTYVISNNENPVWMQHFNVPVAHY
AAEVQFLVKDDDIVGSQLMGTVAVPLEQIYGGGKIEGSFPILNSSGRPCKAGAVLSISVQ
YYPIDKLSVYHHGVGAGPEYYGVPGTYFPLRMGGTVTLYQDAHVPDGSLPNLMLDFGMQY
VHGKCWRDICNAIRQARRLIYITGWSVWHKVRLVRDDASLDKYTLGDLLKSKSQEGVRVL
LLVWDDPTSRSILGYKTDGVMATHDEETRSFFKHSSVKVLLCPRVAGKRHSWVKQREVGV
IYTHHQKTVIVDADAGNNRRKIIAFVGGLDLCDGRYDTPEHPLFRTLQTVHSDDYHNPTY
AGSVAGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKASKPHGIKKLKTSYDDALLRIER
MPEILGISDAPSVSGDDPNGWHVQIFRSIDSNSVKGFPKDPKEATMKNLVCGKNVLIDMS
IHTAYVKAIRAAQHFIYIENQYFIGSSFNWSQHKDIGKKIFSCYV

Transcript Sequence

Gene sequence data has not been registered.